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6C6B

Co-crystal structure of adenylyl-sulfate kinase from Cryptococcus neoformans bound to ADP

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2017-11-16
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)0.97872
Spacegroup nameP 31
Unit cell lengths86.330, 86.330, 160.810
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution30.662 - 2.000
R-factor0.2252
Rwork0.224
R-free0.26720
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6b8v
RMSD bond length0.008
RMSD bond angle0.976
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwarePHENIX (dev_2499)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]30.66230.6622.050
High resolution limit [Å]2.0008.9402.000
Rmerge0.0580.0340.575
Rmeas0.0670.0390.667
Total number of observations347491
Number of reflections904869996771
<I/σ(I)>14.533.732.25
Completeness [%]99.99899.9
Redundancy3.843.6633.855
CC(1/2)0.9980.9970.707
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29018.6 mg/mL CrneC.00830.a.B1, PS38292 with JCSG+ A8 (0.2 M ammonium formate, 20% w/v PEG3350, 5 mM magnesium chloride, 5 mM ADP), cryoprotectant: 20% ethylene glycol, 5 mM magnesium chloride, 5 mM ADP, tray 295929, puck gmh8-1

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