6BM9
Directed evolutionary changes in MBL super family - VIM-2 Round 10
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-03-01 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9537 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 128.596, 41.672, 156.764 |
Unit cell angles | 90.00, 99.41, 90.00 |
Refinement procedure
Resolution | 37.892 - 2.190 |
R-factor | 0.2234 |
Rwork | 0.221 |
R-free | 0.26720 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ko3 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.709 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 37.140 | 2.268 |
High resolution limit [Å] | 2.190 | 2.190 |
Rmerge | 0.094 | 0.764 |
Rmeas | 0.110 | 0.907 |
Rpim | 0.057 | 0.484 |
Number of reflections | 41962 | 4019 |
<I/σ(I)> | 11.28 | |
Completeness [%] | 97.8 | 95.73 |
Redundancy | 3.6 | 3.4 |
CC(1/2) | 0.996 | 0.609 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291.15 | 0.1 M HEPES (pH 7.5), 1.2 M Sodium Citrate, 0.5 mM TCEP, 1.25 mM PNPP, 25 mM HEPES, 75 mM NaCl, 100 uM ZnCl2 |