6BJI
Human ABO(H) blood group glycosyltransferase GTA D302C mutant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SEALED TUBE |
Source details | RIGAKU |
Temperature [K] | 113 |
Detector technology | IMAGE PLATE |
Collection date | 2006-11-25 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 52.580, 149.570, 79.560 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.790 - 1.540 |
R-factor | 0.1824 |
Rwork | 0.181 |
R-free | 0.20870 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1lz0 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.411 |
Data reduction software | CrystalClear |
Data scaling software | d*TREK (9.4SSI) |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 19.790 | 19.790 | 1.600 |
High resolution limit [Å] | 1.540 | 3.310 | 1.540 |
Rmerge | 0.038 | 0.019 | 0.320 |
Rmeas | 0.038 | ||
Total number of observations | 206457 | 23354 | 16717 |
Number of reflections | 46171 | 4563 | 4608 |
<I/σ(I)> | 17.2 | 54.6 | 3.3 |
Completeness [%] | 98.7 | 93.3 | 100 |
Redundancy | 4.44 | 5.05 | 3.61 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | SMALL TUBES | 277 | Spontaneous crystals were recovered from concentrated stocks of GTA/D302C (95-100 mg/mL) stored in 50 mM MOPS, pH 7.00, 0.1 M sodium chloride, 1 mM DTT, 5 mM manganese chloride, and kept at 277 K. |