6BIC
2.25 A resolution structure of Norovirus 3CL protease in complex with a triazole-based macrocyclic inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-07-25 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.00000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 37.602, 66.271, 125.283 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 33.136 - 2.250 |
R-factor | 0.2205 |
Rwork | 0.217 |
R-free | 0.28010 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5t6d |
RMSD bond length | 0.006 |
RMSD bond angle | 0.815 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.12) |
Phasing software | PHASER (2.5.7) |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.520 | 45.520 | 2.320 |
High resolution limit [Å] | 2.250 | 9.000 | 2.250 |
Rmerge | 0.196 | 0.059 | 1.418 |
Total number of observations | 301166 | ||
Number of reflections | 15565 | 304 | 1402 |
<I/σ(I)> | 13.5 | ||
Completeness [%] | 100.0 | 99.6 | 99.8 |
Redundancy | 19.3 | 15.7 | 18.7 |
CC(1/2) | 0.998 | 0.999 | 0.920 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 30% w/v PEG2000 MME, 0.1 M potassium thiocyanate |