6B9Y
Trastuzumab Fab v3 in complex with 5-phenyl meditope variant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2017-01-04 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 52.990, 104.600, 116.290 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.903 - 2.140 |
R-factor | 0.1733 |
Rwork | 0.171 |
R-free | 0.21780 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ioi |
RMSD bond length | 0.006 |
RMSD bond angle | 0.865 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 31.350 | 2.200 |
High resolution limit [Å] | 2.140 | 2.140 |
Rmeas | 0.180 | 1.090 |
Number of reflections | 36407 | 2655 |
<I/σ(I)> | 9.1 | 1.65 |
Completeness [%] | 99.9 | 100 |
Redundancy | 4.8 | 4.7 |
CC(1/2) | 0.994 | 0.568 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.1 M Tris pH 7.5, 15% PEG3350, 24 mM NaCl |