6B0V
Crystal Structure of small molecule ARS-107 covalently bound to K-Ras G12C
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.2 |
Synchrotron site | ALS |
Beamline | 8.2.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-08-14 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.999995 |
Spacegroup name | P 1 |
Unit cell lengths | 33.140, 39.880, 62.430 |
Unit cell angles | 77.00, 81.24, 77.58 |
Refinement procedure
Resolution | 32.171 - 1.290 |
R-factor | 0.1841 |
Rwork | 0.182 |
R-free | 0.21830 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5f2e |
RMSD bond length | 0.023 |
RMSD bond angle | 2.478 |
Data reduction software | iMOSFLM |
Data scaling software | SCALA (3.3.21) |
Phasing software | PHASER (2.5.6) |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 32.171 | 32.171 | 1.360 |
High resolution limit [Å] | 1.290 | 4.080 | 1.290 |
Rmerge | 0.073 | 0.341 | |
Rmeas | 0.104 | 0.088 | 0.415 |
Rpim | 0.059 | 0.049 | 0.234 |
Number of reflections | 68823 | 2153 | 9716 |
<I/σ(I)> | 6.1 | 8 | 2 |
Completeness [%] | 90.4 | 89.7 | 87.5 |
Redundancy | 2.8 | 3.1 | 3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 293 | 29% PEG 4000, 0.2 M CaCl2, 0.1 M Tris pH=8.5 |