6APE
Crystal Structure of Bifunctional protein FolD from Helicobacter pylori
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-06-23 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.97872 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 69.880, 109.040, 83.800 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 33.222 - 1.450 |
R-factor | 0.1675 |
Rwork | 0.167 |
R-free | 0.18240 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3p2o |
RMSD bond length | 0.006 |
RMSD bond angle | 0.794 |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX (1.12rc2_2821) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 33.222 | 33.222 | 1.490 |
High resolution limit [Å] | 1.450 | 6.480 | 1.450 |
Rmerge | 0.035 | 0.025 | 0.421 |
Rmeas | 0.037 | 0.028 | 0.454 |
Total number of observations | 409285 | ||
Number of reflections | 56895 | 700 | 4133 |
<I/σ(I)> | 28.34 | 61.72 | 4.19 |
Completeness [%] | 99.9 | 97 | 100 |
Redundancy | 7.194 | 6.133 | 7.178 |
CC(1/2) | 1.000 | 0.999 | 0.935 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 290 | Tray 291037 Morpheus A3: 10% w/v PEG 4000, 20% v/v glycerol 0.03 M of each divalent cation (0.3 M magnesium chloride, 0.3 M calcium chloride) 0.1 M MES/imidazole pH 6.5 : cryo: direct: HepyC.00934.a.B1 PS38251 at 20 mg/ml, puck mxk4-8 |