6AJI
Crystal structure of mycolic acid transporter MmpL3 from Mycobacterium smegmatis complexed with Rimonabant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-12-03 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 87.696, 140.598, 141.833 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.812 - 2.900 |
R-factor | 0.2313 |
Rwork | 0.230 |
R-free | 0.25410 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6ajf |
RMSD bond length | 0.007 |
RMSD bond angle | 0.987 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 99.852 | 47.278 | 3.060 |
High resolution limit [Å] | 2.900 | 9.170 | 2.900 |
Rmerge | 0.030 | 0.700 | |
Rmeas | 0.062 | 0.033 | 0.759 |
Rpim | 0.025 | 0.013 | 0.291 |
Number of reflections | 39501 | 1387 | 5682 |
<I/σ(I)> | 15.3 | 12.2 | 1.1 |
Completeness [%] | 99.7 | 98.9 | 100 |
Redundancy | 6.3 | 5.6 | 6.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 289 | 10%-20% (v/v) polyethylene glycol monomethyl ether 350 (PEGMME 350), 50 mM ADA (N-(2-Acetamido) iminodiacetic acid) (pH 6.0-7.0), 7.5%-17.5% (v/v) polyethylene glycol 2000 (PEG 2000) |