Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6AFX

Proton pyrophosphatase - E225A

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSRRC BEAMLINE TPS 05A
Synchrotron siteNSRRC
BeamlineTPS 05A
Temperature [K]100
Detector technologyCCD
Collection date2018-03-08
DetectorRAYONIX MX300-HS
Wavelength(s)1.0
Spacegroup nameC 1 2 1
Unit cell lengths217.197, 88.321, 158.843
Unit cell angles90.00, 125.14, 90.00
Refinement procedure
Resolution29.801 - 2.301
R-factor0.1656
Rwork0.165
R-free0.19890
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4a01
RMSD bond length0.008
RMSD bond angle1.065
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX (1.8.2_1309)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]30.00030.0002.380
High resolution limit [Å]2.3004.9502.300
Rmerge0.0710.0290.707
Rmeas0.0760.0320.765
Rpim0.0280.0120.288
Number of reflections141563110019952
<I/σ(I)>10.7
Completeness [%]99.099.192
Redundancy7.57.46.4
CC(1/2)0.9990.885
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.5293100 mM MES (pH 6.5), 250 mM MgCl2, 23% (w/v) PEG2KMME and 10% glycerol

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon