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6AFO

Crystal structure of class A b-lactamase, PenL, variant Asn136Asp, from Burkholderia thailandensis

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPAL/PLS BEAMLINE 5C (4A)
Synchrotron sitePAL/PLS
Beamline5C (4A)
Temperature [K]100
Detector technologyCCD
Collection date2012-12-05
DetectorADSC QUANTUM 315r
Wavelength(s)0.97954
Spacegroup nameP 1 21 1
Unit cell lengths34.986, 92.723, 68.878
Unit cell angles90.00, 92.72, 90.00
Refinement procedure
Resolution31.772 - 1.399
R-factor0.1487
Rwork0.147
R-free0.17390
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5gl9
RMSD bond length0.014
RMSD bond angle1.590
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareMOLREP
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.420
High resolution limit [Å]1.3991.399
Rmerge0.0800.271
Number of reflections861314254
<I/σ(I)>40.23
Completeness [%]99.0
Redundancy7.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP293100 mM sodium acetate pH 5.0 200 mM sodium chloride 25% (w/v) polyethylene glycol 3350

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