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6A7V

Crystal structure of Mycobacterium tuberculosis VapBC11 toxin-antitoxin complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID29
Synchrotron siteESRF
BeamlineID29
Temperature [K]100
Detector technologyPIXEL
Collection date2017-07-01
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)1.0723
Spacegroup nameP 21 21 21
Unit cell lengths50.555, 127.007, 151.207
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution97.250 - 1.670
R-factor0.1843
Rwork0.183
R-free0.20860
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4chg
RMSD bond length0.009
RMSD bond angle1.298
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwareREFMAC (3.3.22)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]97.25247.9461.760
High resolution limit [Å]1.6705.2801.670
Rmerge0.0210.881
Rmeas0.0500.0240.999
Rpim0.0230.0120.461
Total number of observations5175611658771241
Number of reflections113379388716176
<I/σ(I)>15.751.21.4
Completeness [%]99.799.298.8
Redundancy4.64.34.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1MICROBATCH6.52930.1M Ammonium Sulphate, 0.3M Sodium formate, 0.1 Sodium cacodylate, 3 % w/v PGA-LM, 30% PEG400 (pH 6.5)

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PDB entries from 2024-05-01

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