6A6P
Crystal Structure of Peroxisome Proliferator-Activated Receptor Delta (PPARd)LBD in Complex with DN003316
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PAL/PLS BEAMLINE 5C (4A) |
| Synchrotron site | PAL/PLS |
| Beamline | 5C (4A) |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2018-06-18 |
| Detector | ADSC QUANTUM 315r |
| Wavelength(s) | 0.97960 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 39.605, 95.749, 96.936 |
| Unit cell angles | 90.00, 97.91, 90.00 |
Refinement procedure
| Resolution | 38.201 - 2.100 |
| R-factor | 0.1953 |
| Rwork | 0.194 |
| R-free | 0.22780 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5u3r |
| RMSD bond length | 0.008 |
| RMSD bond angle | 0.994 |
| Data scaling software | HKL-2000 |
| Refinement software | PHENIX ((1.13_2998)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.000 | 2.140 |
| High resolution limit [Å] | 2.100 | 2.100 |
| Rmerge | 0.102 | |
| Number of reflections | 41153 | |
| <I/σ(I)> | 19.01 | |
| Completeness [%] | 98.3 | |
| Redundancy | 5.3 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | LIQUID DIFFUSION | 6.5 | 291.15 | 0.2~0.3M Sodium flouride, 0.1M MES(pH 6.5) |






