6A5Z
Crystal structure of human FXR/RXR-LBD heterodimer bound to HNC180 and 9cRA and SRC1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-07-17 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9778 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 89.530, 96.130, 114.240 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 73.550 - 2.950 |
R-factor | 0.2245 |
Rwork | 0.221 |
R-free | 0.28200 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.526 |
Data scaling software | Aimless (0.5.32) |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 89.530 | 89.530 | 3.130 |
High resolution limit [Å] | 2.950 | 8.850 | 2.950 |
Rmerge | 0.182 | 0.118 | 0.575 |
Rmeas | 0.214 | 0.143 | 0.671 |
Rpim | 0.110 | 0.078 | 0.338 |
Total number of observations | 73288 | 2721 | 12127 |
Number of reflections | 20868 | 852 | 3340 |
<I/σ(I)> | 5.4 | 11.3 | 2 |
Completeness [%] | 98.0 | 97 | 98.8 |
Redundancy | 3.5 | 3.2 | 3.6 |
CC(1/2) | 0.955 | 0.936 | 0.722 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 277 | 0.2 M Ammonium iodide, 20% w/v Polyethylene glycol 3,350 |