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6ZYQ

Structure of NDM-1 with 2-Mercaptomethyl-thiazolidine D-syn-1b

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2018-03-04
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.97629
Spacegroup nameP 21 21 21
Unit cell lengths70.180, 73.840, 77.440
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution38.720 - 1.700
R-factor0.1785
Rwork0.177
R-free0.19760
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6rmf
RMSD bond length0.009
RMSD bond angle0.988
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.12_2829)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]38.7201.740
High resolution limit [Å]1.7001.700
Rpim0.0310.596
Number of reflections447863076
<I/σ(I)>13.11.2
Completeness [%]99.5
Redundancy12.2
CC(1/2)0.9990.473
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2920.1M bis-tris pH 5.8, 32% PEG 3350, 0.15M NH4SO4

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