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6ZNW

Methanosaeta concilii ATP citrate lyase (D541A mutant) in complex with (3S)-citryl-CoA.

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P14 (MX2)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP14 (MX2)
Temperature [K]100
Detector technologyPIXEL
Collection date2020-06-25
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.976245
Spacegroup nameI 2 2 2
Unit cell lengths73.531, 154.373, 276.054
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution79.040 - 2.121
R-factor0.1866
Rwork0.186
R-free0.20340
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6hxi
RMSD bond length0.008
RMSD bond angle0.930
Data reduction softwareXDS (20200131)
Data scaling softwareAimless (0.7.4)
Phasing softwarePHASER (2.8.3)
Refinement softwareBUSTER (2.10.3)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]139.0002.250
High resolution limit [Å]2.1202.120
Rmeas0.0112.596
Number of reflections8857913824
<I/σ(I)>18.580.92
Completeness [%]99.296.5
Redundancy13.611.4
CC(1/2)0.9990.511
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.52930.02 M xylitol 0.02 M myo-inositol 0.02 M D-(-)-fructose 0.02 M L-rhamnose monohydrate 0.02 M D-sorbitol 0.1 M BES/Triethanolamine pH 7.5 12.5 % PEG4000 20 % 1,2,6-hexanetriol

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PDB entries from 2024-05-15

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