6Z5T
SARS-CoV-2 Macrodomain in complex with ADP-ribose
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-04-24 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.976230 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 58.782, 76.334, 82.326 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 55.975 - 1.571 |
R-factor | 0.2115 |
Rwork | 0.209 |
R-free | 0.24930 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2acf |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 82.330 | 1.600 |
High resolution limit [Å] | 1.570 | 1.570 |
Rmeas | 0.368 | |
Rpim | 0.101 | |
Total number of observations | 685076 | |
Number of reflections | 52532 | 2610 |
<I/σ(I)> | 4.1 | 0.3 |
Completeness [%] | 100.0 | 100 |
Redundancy | 13 | 12.3 |
CC(1/2) | 0.708 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 1.775 M DL-Malic Acid pH 7.0 10 mM TCEP |