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6Z5T

SARS-CoV-2 Macrodomain in complex with ADP-ribose

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2020-04-24
DetectorDECTRIS EIGER2 XE 16M
Wavelength(s)0.976230
Spacegroup nameP 21 21 21
Unit cell lengths58.782, 76.334, 82.326
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution55.975 - 1.571
R-factor0.2115
Rwork0.209
R-free0.24930
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2acf
Data reduction softwarexia2
Data scaling softwarexia2
Phasing softwarePHASER
Refinement softwarePHENIX (1.13_2998)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]82.3301.600
High resolution limit [Å]1.5701.570
Rmeas0.368
Rpim0.101
Total number of observations685076
Number of reflections525322610
<I/σ(I)>4.10.3
Completeness [%]100.0100
Redundancy1312.3
CC(1/2)0.708
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2931.775 M DL-Malic Acid pH 7.0 10 mM TCEP

219869

PDB entries from 2024-05-15

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