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6YVQ

Crystal structure of SAICAR Synthetase (PurC) from Mycobacterium abscessus in apo form

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I02
Synchrotron siteDiamond
BeamlineI02
Temperature [K]100
Detector technologyPIXEL
Collection date2015-10-07
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.9795
Spacegroup nameP 1 21 1
Unit cell lengths48.078, 64.287, 48.020
Unit cell angles90.00, 110.55, 90.00
Refinement procedure
Resolution45.018 - 1.480
R-factor0.1637
Rwork0.162
R-free0.19680
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3r9r
RMSD bond length0.006
RMSD bond angle1.045
Data reduction softwareXDS
Data scaling softwareAimless (0.5.1)
Phasing softwarePHASER (2.5.6)
Refinement softwarePHENIX (1.9-1692)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]45.02045.0201.580
High resolution limit [Å]1.4804.1801.480
Rmerge0.0740.0580.277
Rmeas0.0850.0660.340
Rpim0.0400.0320.191
Number of reflections4102720754713
<I/σ(I)>10.8
Completeness [%]89.799.257.4
Redundancy4.14.32.9
CC(1/2)0.9940.9930.892
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2920.2 M LiSO4, 0.1 M Bis-Tris pH 5.5, 25 % PEG 3350

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PDB entries from 2024-05-15

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