6YSP
Arabidopsis aspartate transcarbamoylase complex with PALA and carbamoyl phosphate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALBA BEAMLINE XALOC |
Synchrotron site | ALBA |
Beamline | XALOC |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-05-19 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97924 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 86.484, 94.570, 131.839 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 76.840 - 1.380 |
R-factor | 0.146 |
Rwork | 0.145 |
R-free | 0.16760 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6ypo |
RMSD bond length | 0.009 |
RMSD bond angle | 1.095 |
Data reduction software | autoPROC |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 76.840 | 1.430 |
High resolution limit [Å] | 1.380 | 1.380 |
Rmerge | 0.100 | 1.154 |
Number of reflections | 221343 | 21917 |
<I/σ(I)> | 10.71 | 1.35 |
Completeness [%] | 100.0 | 99.98 |
Redundancy | 6.7 | 6.6 |
CC(1/2) | 0.994 | 0.512 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 294 | Protein at 5 mg/ml in 20 mM Tris pH 7.0, 0.1 M NaCl, 2% glycerol, 0.2 mM tris(2-carboxyethyl) phosphine (TCEP) and 2 mM PALA Crystallization condition: 25% PEG3350, 0.2 M Li2SO4 and 0.1 M bis-tris pH 5.5. Crystals soaked in mother liquor plus 2 mM PALA and 10 mM carbamoyl phosphate with increasing glycerol concentration (up to 20%) prior to freezing |