6YSP
Arabidopsis aspartate transcarbamoylase complex with PALA and carbamoyl phosphate
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALBA BEAMLINE XALOC |
| Synchrotron site | ALBA |
| Beamline | XALOC |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2018-05-19 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.97924 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 86.484, 94.570, 131.839 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 76.840 - 1.380 |
| R-factor | 0.146 |
| Rwork | 0.145 |
| R-free | 0.16760 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 6ypo |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.095 |
| Data reduction software | autoPROC |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 76.840 | 1.430 |
| High resolution limit [Å] | 1.380 | 1.380 |
| Rmerge | 0.100 | 1.154 |
| Number of reflections | 221343 | 21917 |
| <I/σ(I)> | 10.71 | 1.35 |
| Completeness [%] | 100.0 | 99.98 |
| Redundancy | 6.7 | 6.6 |
| CC(1/2) | 0.994 | 0.512 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION | 294 | Protein at 5 mg/ml in 20 mM Tris pH 7.0, 0.1 M NaCl, 2% glycerol, 0.2 mM tris(2-carboxyethyl) phosphine (TCEP) and 2 mM PALA Crystallization condition: 25% PEG3350, 0.2 M Li2SO4 and 0.1 M bis-tris pH 5.5. Crystals soaked in mother liquor plus 2 mM PALA and 10 mM carbamoyl phosphate with increasing glycerol concentration (up to 20%) prior to freezing |






