6YP2
14-3-3 sigma with RelA/p65 binding site pS45 and covalently bound TCF521-011
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SEALED TUBE |
Source details | RIGAKU MICROMAX-003 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-10-01 |
Detector | DECTRIS PILATUS 200K |
Wavelength(s) | 1.54187 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 82.384, 112.219, 62.556 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 41.769 - 1.800 |
R-factor | 0.1779 |
Rwork | 0.176 |
R-free | 0.21960 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6qhl |
RMSD bond length | 0.009 |
RMSD bond angle | 0.875 |
Data reduction software | DIALS |
Data scaling software | Aimless (0.7.4) |
Phasing software | MOLREP |
Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 41.770 | 41.770 | 1.840 |
High resolution limit [Å] | 1.800 | 9.000 | 1.800 |
Rmerge | 0.064 | 0.016 | 0.249 |
Rmeas | 0.076 | 0.019 | 0.310 |
Rpim | 0.040 | 0.010 | 0.180 |
Total number of observations | 633 | 3484 | |
Number of reflections | 26657 | 232 | 1450 |
<I/σ(I)> | 13.9 | 58.2 | 2.6 |
Completeness [%] | 98.1 | 91.5 | 90.4 |
Redundancy | 3.1 | 2.7 | 2.4 |
CC(1/2) | 0.997 | 1.000 | 0.914 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 277 | 0.095 M HEPES Na pH 7.1, 27% PEG400, 0.19M Calcium chloride, 5% Glycerol |