6YEN
Crystal structure of AmpC from E. coli with Taniborbactam (VNRX-5133)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-02-18 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9787 |
Spacegroup name | P 43 3 2 |
Unit cell lengths | 137.229, 137.229, 137.229 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 97.036 - 1.418 |
R-factor | 0.1454 |
Rwork | 0.144 |
R-free | 0.16870 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1iem |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.3) |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 97.040 | 97.040 | 1.500 |
High resolution limit [Å] | 1.418 | 4.490 | 1.420 |
Rmerge | 0.134 | 0.044 | 6.378 |
Rmeas | 0.135 | 0.044 | 6.419 |
Rpim | 0.015 | 0.005 | 0.722 |
Number of reflections | 83520 | 2966 | 11993 |
<I/σ(I)> | 26.6 | 113.9 | 1 |
Completeness [%] | 100.0 | 100 | 100 |
Redundancy | 76.8 | 67.5 | 78.6 |
CC(1/2) | 1.000 | 1.000 | 0.441 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 298 | 0.1 M MES pH 6.0, 15 % PEG6000, 0.01 M ZnCl2 |