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6YCQ

Crystal structure of the DNA binding domain of Arabidopsis thaliana Auxin Response Factor 1 (AtARF1) in complex with High Affinity DNA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALBA BEAMLINE XALOC
Synchrotron siteALBA
BeamlineXALOC
Temperature [K]100
Detector technologyPIXEL
Collection date2015-03-05
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9793
Spacegroup nameP 1 21 1
Unit cell lengths43.304, 102.784, 127.039
Unit cell angles90.00, 98.04, 90.00
Refinement procedure
Resolution47.570 - 1.650
R-factor0.173
Rwork0.172
R-free0.19910
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4ldx
RMSD bond length0.008
RMSD bond angle0.963
Data reduction softwareXDS
Data scaling softwareautoPROC
Phasing softwarePHASER
Refinement softwarePHENIX (1.16_3549)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.5801.680
High resolution limit [Å]1.6501.651
Number of reflections7514682
<I/σ(I)>15.9
Completeness [%]88.1
Redundancy3.4
CC(1/2)0.9990.512
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP291B10 condition of the Morpheus HT screen: 0.09 M (0.3M Sodium fluoride, 0.3M Sodium bromide, 0.3M Sodium iodide); 0.1 M (Tris (base), BICINE pH8.5); 20% v/v Ethylene glycol; 10 % w/v PEG 8000

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