Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6Y6S

Mouse Galactocerebrosidase complexed with galacto-noeurostegine GNS at pH 6.8

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyPIXEL
Collection date2015-11-21
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.979
Spacegroup nameH 3 2
Unit cell lengths248.721, 248.721, 77.326
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution56.070 - 2.100
R-factor0.1653
Rwork0.163
R-free0.20130
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3zr5
RMSD bond length0.007
RMSD bond angle0.842
Data reduction softwareDIALS
Data scaling softwareDIALS
Phasing softwarePHENIX
Refinement softwarePHENIX (1.16_3549)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]124.3602.140
High resolution limit [Å]2.1002.100
Rmerge0.153
Number of reflections530722623
<I/σ(I)>8.2
Completeness [%]100.0
Redundancy10
CC(1/2)0.9970.461
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2930.2 M sodium acetate, 0.1 M sodium cacodylate (pH 6.8), and 34% wt/vol polyethylene glycol 8000

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon