6Y63
Structure of Sheep Polyomavirus VP1 in complex with 3'-Sialyllactosamine
This is a non-PDB format compatible entry.
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SLS BEAMLINE X06DA |
| Synchrotron site | SLS |
| Beamline | X06DA |
| Temperature [K] | 93 |
| Detector technology | PIXEL |
| Collection date | 2019-11-16 |
| Detector | DECTRIS PILATUS 2M-F |
| Wavelength(s) | 0.999 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 130.286, 79.930, 145.884 |
| Unit cell angles | 90.00, 116.00, 90.00 |
Refinement procedure
| Resolution | 48.807 - 1.651 |
| Rwork | 0.169 |
| R-free | 0.19990 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4fmg |
| RMSD bond length | 0.007 |
| RMSD bond angle | 1.481 |
| Data reduction software | XDS |
| Data scaling software | XDS |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0253) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 48.810 | 1.710 |
| High resolution limit [Å] | 1.651 | 1.651 |
| Rmeas | 0.101 | 1.547 |
| Number of reflections | 322288 | 31681 |
| <I/σ(I)> | 13.87 | 1.22 |
| Completeness [%] | 99.8 | |
| Redundancy | 6.8 | |
| CC(1/2) | 0.999 | 0.471 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 293.15 | KSCN, PEG 3350 |
