6Y4I
Structural and Kinetic Evaluation of Phosphoramidate Inhibitors on Thermolysin
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | BESSY BEAMLINE 14.2 |
| Synchrotron site | BESSY |
| Beamline | 14.2 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-06-01 |
| Detector | DECTRIS PILATUS3 S 2M |
| Wavelength(s) | 0.9184 |
| Spacegroup name | P 61 2 2 |
| Unit cell lengths | 92.612, 92.612, 129.969 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 46.310 - 1.160 |
| R-factor | 0.127 |
| Rwork | 0.126 |
| R-free | 0.13960 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5lvd |
| RMSD bond length | 0.006 |
| RMSD bond angle | 0.932 |
| Data reduction software | XDS |
| Data scaling software | XDS |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 46.310 | 1.230 |
| High resolution limit [Å] | 1.160 | 1.160 |
| Rmeas | 0.099 | 0.525 |
| Number of reflections | 113185 | 17875 |
| <I/σ(I)> | 10.36 | 2.5 |
| Completeness [%] | 99.7 | 98.9 |
| Redundancy | 6.42 | 6.3 |
| CC(1/2) | 0.996 | 0.879 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 291.15 | 2.0 M CsCl, 50 mM Tris(hydroxymethyl)aminomethan, 50% DMSO |






