6XXO
Crystal structure of NB8, a nanobody targeting prostate specific membrane antigen
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ESRF BEAMLINE ID30B |
| Synchrotron site | ESRF |
| Beamline | ID30B |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2017-02-23 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 0.9677 |
| Spacegroup name | I 2 2 2 |
| Unit cell lengths | 55.945, 68.857, 75.647 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 28.520 - 1.500 |
| R-factor | 0.1634 |
| Rwork | 0.162 |
| R-free | 0.18320 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5m7q |
| RMSD bond length | 0.007 |
| RMSD bond angle | 0.943 |
| Data reduction software | XDS |
| Data scaling software | XDS |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 28.520 | 1.590 |
| High resolution limit [Å] | 1.500 | 1.500 |
| Rmerge | 0.028 | |
| Rmeas | 0.117 | |
| Number of reflections | 23283 | 3733 |
| <I/σ(I)> | 28.37 | |
| Completeness [%] | 97.9 | |
| Redundancy | 3.9 | |
| CC(1/2) | 0.999 | 0.988 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.1M tri-Na Citrate pH 3.5, 3M NaCl |






