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6XWH

Crystal Structure of the Human RXR DNA-Binding Domain Homodimer Bound to the Human Hoxb13 DR0 Response Element

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSOLEIL BEAMLINE PROXIMA 1
Synchrotron siteSOLEIL
BeamlinePROXIMA 1
Temperature [K]100
Detector technologyPIXEL
Collection date2012-09-21
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.984
Spacegroup nameP 1 21 1
Unit cell lengths45.705, 62.522, 53.635
Unit cell angles90.00, 104.84, 90.00
Refinement procedure
Resolution22.220 - 2.100
R-factor0.187
Rwork0.185
R-free0.22400
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4cn5
RMSD bond length0.010
RMSD bond angle1.040
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER (2.5.1)
Refinement softwareBUSTER
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]22.22022.2202.230
High resolution limit [Å]2.1006.2602.100
Rmerge0.0460.02811.082
Rmeas0.0560.03414.112
Total number of observations46744
Number of reflections155426681632
<I/σ(I)>9.2135.440.06
Completeness [%]90.598.259.2
Redundancy3.0083.062.053
CC(1/2)0.9980.997
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29320% PEG 3350, 0.15 M di-sodium DL-malonate

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