6W4W
Crystal Structure of the Fab fragment of humanized 5c8 antibody
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 19-ID |
| Synchrotron site | APS |
| Beamline | 19-ID |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2016-04-08 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 0.97934 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 90.894, 60.305, 73.456 |
| Unit cell angles | 90.00, 96.27, 90.00 |
Refinement procedure
| Resolution | 50.160 - 1.770 |
| R-factor | 0.171 |
| Rwork | 0.169 |
| R-free | 0.20420 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1i9r |
| RMSD bond length | 0.015 |
| RMSD bond angle | 1.758 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHASER (2.6.1) |
| Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.160 | 50.000 | 1.800 |
| High resolution limit [Å] | 1.770 | 4.800 | 1.770 |
| Rmerge | 0.052 | 0.030 | 0.324 |
| Rmeas | 0.057 | 0.032 | 0.356 |
| Rpim | 0.022 | 0.012 | 0.143 |
| Number of reflections | 38013 | 1995 | 1790 |
| <I/σ(I)> | 11.1 | ||
| Completeness [%] | 98.1 | 98.8 | 94.4 |
| Redundancy | 6.3 | 6.5 | 5.6 |
| CC(1/2) | 0.999 | 0.936 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 273 | 33% PEG 3350, 0.1 M Citric Acid/Sodium Citrate pH 4.0 |






