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6VSK

Crystal structure of the P-Rex1 DEP1 domain

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-D
Synchrotron siteAPS
Beamline23-ID-D
Temperature [K]80
Detector technologyPIXEL
Collection date2018-11-02
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1.0332
Spacegroup nameP 63 2 2
Unit cell lengths103.152, 103.152, 67.981
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution19.620 - 3.120
R-factor0.1855
Rwork0.183
R-free0.23320
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1o7f
RMSD bond length0.009
RMSD bond angle1.796
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0258)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0003.170
High resolution limit [Å]3.1203.120
Rmeas0.1520.602
Rpim0.0490.316
Number of reflections4105185
<I/σ(I)>191.3
Completeness [%]99.395.4
Redundancy8.43
CC(1/2)0.713
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.5293.150.1 M HEPES, pH 6.5, 45% w/v poly(acrylic acid sodium salt)2100

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