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6VBR

The crystal structure of the 2009 H1N1/California PA endonuclease wild type in complex with SJ000986248

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2019-08-18
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.000
Spacegroup nameI 4 2 2
Unit cell lengths90.790, 90.790, 134.118
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution38.860 - 2.750
R-factor0.2397
Rwork0.239
R-free0.25480
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5vpt
RMSD bond length0.006
RMSD bond angle0.978
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwareMOLREP
Refinement softwarePHENIX (dev_3965)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]75.1802.880
High resolution limit [Å]2.7502.750
Rmerge0.0601.173
Rmeas0.0641.242
Rpim0.0220.404
Number of reflections7619983
<I/σ(I)>18.62
Completeness [%]100.0100
Redundancy8.79.3
CC(1/2)0.9990.746
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2910.1 M HEPES PH 7.8, 1 M AMMONIUM SULFATE, 10 MM MNCL2, 10 MM MGCL2, 0.5% PVP K15, PH 6.5

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