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6UQI

Crystal structure of Q38A human DNA polymerase eta bound with 8-oxoadenine (oxoA) and non-hydrolyzable dGTP analog (dGTP*)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-D
Synchrotron siteAPS
Beamline23-ID-D
Temperature [K]120
Detector technologyPIXEL
Collection date2019-07-07
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1
Spacegroup nameP 61
Unit cell lengths98.670, 98.670, 81.808
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution50.000 - 2.500
Rwork0.179
R-free0.23900
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4o3n
RMSD bond length0.009
RMSD bond angle1.080
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareMOLREP
Refinement softwarePHENIX (1.15rc3_3435)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.540
High resolution limit [Å]2.5002.500
Rmeas0.432
Rpim0.509
Number of reflections15589761
<I/σ(I)>10.61.4
Completeness [%]100.0
Redundancy15.4
CC(1/2)0.594
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2930.1 M MES, 5 mM MgCl2, 12-21% (w/v) PEG 2K-MME, pH 6.0

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