6UPQ
Crystal Structure of GTPase Domain of Human Septin 2 / Septin 11 Heterocomplex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-09-10 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.96863 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 56.654, 81.859, 68.221 |
Unit cell angles | 90.00, 97.13, 90.00 |
Refinement procedure
Resolution | 56.216 - 1.860 |
R-factor | 0.1882 |
Rwork | 0.187 |
R-free | 0.21780 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6upa |
Data reduction software | xia2 |
Data scaling software | Aimless (0.7.2) |
Phasing software | PHASER |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 67.700 | 67.700 | 1.910 |
High resolution limit [Å] | 1.860 | 8.320 | 1.860 |
Rmerge | 0.192 | 0.060 | 3.126 |
Rmeas | 0.208 | 0.065 | 3.387 |
Rpim | 0.080 | 0.026 | 1.292 |
Total number of observations | 347126 | 3914 | 25676 |
Number of reflections | 51728 | 611 | 3798 |
<I/σ(I)> | 5.8 | 15.5 | 0.9 |
Completeness [%] | 99.6 | 99.9 | 98.9 |
Redundancy | 6.7 | 6.4 | 6.8 |
CC(1/2) | 0.973 | 0.996 | 0.453 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 291 | 100mM MES/imidazole pH 6.5, 10% PEG 20000, 20% PEG 550 MME and 30mM of each sodium nitrate, disodium hydrogen phosphate and ammonium sulfate |