6T7L
Crystal structure of AmpC from E.coli with Nacubactam (OP0595)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-08-01 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.97625 |
Spacegroup name | P 43 3 2 |
Unit cell lengths | 138.178, 138.178, 138.178 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.853 - 1.470 |
R-factor | 0.156 |
Rwork | 0.155 |
R-free | 0.18230 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1iem |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.1) |
Phasing software | PHASER (2.8.1) |
Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 69.090 | 69.090 | 1.510 |
High resolution limit [Å] | 1.470 | 6.570 | 1.470 |
Rmerge | 0.134 | 0.050 | 3.022 |
Rmeas | 0.134 | 0.051 | 3.042 |
Rpim | 0.015 | 0.006 | 0.347 |
Total number of observations | 5815425 | ||
Number of reflections | 76716 | 1031 | 5559 |
<I/σ(I)> | 25.9 | 89.8 | 2.3 |
Completeness [%] | 100.0 | 99.9 | 100 |
Redundancy | 75.8 | 65.5 | 76.2 |
CC(1/2) | 1.000 | 1.000 | 0.831 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 298 | 29% w/v PEG6000, 0.01 M ZnCl2, 0.1 M MES pH=6.0 |