6SJA
Structure of HPV16 E6 oncoprotein in complex with IRF3 LxxLL motif
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-04-27 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 97.659, 132.870, 43.025 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.830 - 1.500 |
R-factor | 0.1606 |
Rwork | 0.159 |
R-free | 0.19050 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4giz |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.832 | 45.832 | 1.590 |
High resolution limit [Å] | 1.500 | 4.480 | 1.500 |
Rmerge | 0.068 | 0.026 | 1.150 |
Rmeas | 0.074 | 0.028 | 1.247 |
Total number of observations | 1192946 | ||
Number of reflections | 170435 | 6514 | 26948 |
<I/σ(I)> | 15.95 | 61.58 | 1.65 |
Completeness [%] | 98.1 | 99.5 | 95.7 |
Redundancy | 6.999 | 7.595 | 6.704 |
CC(1/2) | 0.999 | 0.999 | 0.618 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 6.8 | 298 | PEG 1500 30% |