6S08
Crystal Structure of Properdin (TSR domains N1 & 456)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ESRF BEAMLINE ID23-1 |
| Synchrotron site | ESRF |
| Beamline | ID23-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2018-11-03 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.9789 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 111.995, 114.860, 39.822 |
| Unit cell angles | 90.00, 99.56, 90.00 |
Refinement procedure
| Resolution | 79.610 - 2.030 |
| R-factor | 0.2136 |
| Rwork | 0.212 |
| R-free | 0.24760 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.008 |
| RMSD bond angle | 1.589 |
| Data reduction software | DIALS |
| Data scaling software | STARANISO |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 79.610 | 2.305 |
| High resolution limit [Å] | 2.030 | 2.030 |
| Rmerge | 0.161 | 1.249 |
| Rmeas | 0.190 | 1.482 |
| Rpim | 0.100 | 0.784 |
| Number of reflections | 17424 | 871 |
| <I/σ(I)> | 3.4 | 1.5 |
| Completeness [%] | 54.5 | 8.7 |
| Redundancy | 3.5 | 3.4 |
| CC(1/2) | 0.982 | 0.469 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 291 | Potassium Sulphate, PEG 3350 |






