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6QF4

X-Ray structure of human Serine/Threonine Kinase 17B (STK17B) aka DRAK2 in complex with ADP obtained by on-chip soaking

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, DESY BEAMLINE P11
Synchrotron sitePETRA III, DESY
BeamlineP11
Temperature [K]100
Detector technologyPIXEL
Collection date2018-04-06
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1.0
Spacegroup nameP 41 2 2
Unit cell lengths85.479, 85.479, 118.073
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution42.739 - 2.495
R-factor0.1871
Rwork0.183
R-free0.22680
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3lm5
RMSD bond length0.002
RMSD bond angle0.476
Data reduction softwareXDS
Data scaling softwareAimless (0.5.8)
Phasing softwarePHASER
Refinement softwarePHENIX (1.10.1-2155_9999)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]42.74042.7402.600
High resolution limit [Å]2.4959.0002.500
Rmerge0.1070.0630.493
Rmeas0.1130.0670.522
Rpim0.0360.0220.166
Number of reflections155293791743
<I/σ(I)>14.75.3
Completeness [%]98.695.399.6
Redundancy9.38.39.7
CC(1/2)0.9970.9970.922
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1BATCH MODE7.52950.2M ammonium acetate, 20% PEG 3350, 50mM sodium/potassium tartrate, 0.8mM quercetin

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