6PXC
N-Terminal SH2 domain of the p120RasGAP bound to a p190RhoGAP phosphotyrosine peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-06-06 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.97910 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 44.190, 64.827, 87.239 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.620 - 1.600 |
R-factor | 0.1858 |
Rwork | 0.184 |
R-free | 0.20970 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4k44 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.660 |
High resolution limit [Å] | 1.600 | 3.450 | 1.600 |
Rmerge | 0.158 | 0.135 | 1.110 |
Rmeas | 0.163 | 0.139 | 1.182 |
Rpim | 0.039 | 0.033 | 0.398 |
Total number of observations | 265969 | ||
Number of reflections | 16868 | 1800 | 1652 |
<I/σ(I)> | 11.3 | ||
Completeness [%] | 100.0 | 100 | 99.9 |
Redundancy | 15.8 | 17.3 | 8.6 |
CC(1/2) | 0.994 | 0.733 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 1.8M Sodium Malonate 0.1M Bis Tris 6.5 2% PEG MME 550 |