Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6P8M

Crystal Structure of Antibody P-p3b3 A60C Heavy Chain in Complex with 426c HIV-1 gp120 core G459C

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.2
Synchrotron siteALS
Beamline5.0.2
Temperature [K]100
Detector technologyPIXEL
Collection date2018-10-04
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1
Spacegroup nameC 2 2 2
Unit cell lengths146.796, 176.755, 108.573
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.000 - 3.594
R-factor0.2341
Rwork0.232
R-free0.26800
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6mft
RMSD bond length0.003
RMSD bond angle0.737
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX ((1.15.2_3472))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0003.650
High resolution limit [Å]3.5903.590
Number of reflections11547468
<I/σ(I)>7.751.075
Completeness [%]82.575.8
Redundancy2.82.4
CC(1/2)0.9900.801
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.52930.67% PEG 4000, 0.67M Ammonium Citrate pH 5.5

229380

PDB entries from 2024-12-25

PDB statisticsPDBj update infoContact PDBjnumon