6P3Q
Calpain-5 (CAPN5) Protease Core (PC)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALS BEAMLINE 4.2.2 |
| Synchrotron site | ALS |
| Beamline | 4.2.2 |
| Temperature [K] | 100 |
| Detector technology | CMOS |
| Collection date | 2016-07-16 |
| Detector | RDI CMOS_8M |
| Wavelength(s) | 1.0000 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 84.038, 51.576, 110.635 |
| Unit cell angles | 90.00, 110.42, 90.00 |
Refinement procedure
| Resolution | 51.840 - 2.800 |
| R-factor | 0.2295 |
| Rwork | 0.227 |
| R-free | 0.28510 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | SAXS guided homology model |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.120 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 51.840 | 2.900 |
| High resolution limit [Å] | 2.800 | 2.800 |
| Rmeas | 0.087 | 0.623 |
| Number of reflections | 22239 | 2233 |
| <I/σ(I)> | 10.8 | 1.73 |
| Completeness [%] | 99.4 | 99.07 |
| Redundancy | 2 | 2 |
| CC(1/2) | 0.996 | 0.804 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 6 | 291 | 250 mM sodium phosphate, 12 % PEG 8000, 36 mM EDTA, 10 mM Calcium chloride, 0.4 mM H-E(EDANS)-KIEIVRKKPIFKKATV-K(DASBCYL)-OH |






