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6P3Q

Calpain-5 (CAPN5) Protease Core (PC)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 4.2.2
Synchrotron siteALS
Beamline4.2.2
Temperature [K]100
Detector technologyCMOS
Collection date2016-07-16
DetectorRDI CMOS_8M
Wavelength(s)1.0000
Spacegroup nameP 1 21 1
Unit cell lengths84.038, 51.576, 110.635
Unit cell angles90.00, 110.42, 90.00
Refinement procedure
Resolution51.840 - 2.800
R-factor0.2295
Rwork0.227
R-free0.28510
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)SAXS guided homology model
RMSD bond length0.010
RMSD bond angle1.120
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.16_3549)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]51.8402.900
High resolution limit [Å]2.8002.800
Rmeas0.0870.623
Number of reflections222392233
<I/σ(I)>10.81.73
Completeness [%]99.499.07
Redundancy22
CC(1/2)0.9960.804
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6291250 mM sodium phosphate, 12 % PEG 8000, 36 mM EDTA, 10 mM Calcium chloride, 0.4 mM H-E(EDANS)-KIEIVRKKPIFKKATV-K(DASBCYL)-OH

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