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6OEA

Crystal structure of HMCES SRAP domain in complex with longer 3' overhang DNA

Replaces:  6NLC
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.1
Synchrotron siteALS
Beamline5.0.1
Temperature [K]100
Detector technologyPIXEL
Collection date2018-09-18
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.977410
Spacegroup nameI 1 2 1
Unit cell lengths55.863, 52.060, 148.309
Unit cell angles90.00, 93.11, 90.00
Refinement procedure
Resolution49.160 - 2.100
R-factor0.2098
Rwork0.208
R-free0.24200
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)5ko9
RMSD bond length0.009
RMSD bond angle1.563
Data reduction softwareXDS
Data scaling softwareAimless (0.7.4)
Phasing softwareREFMAC
Refinement softwareREFMAC
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]49.11049.1102.160
High resolution limit [Å]2.1008.9102.100
Rmerge0.0640.0330.812
Rmeas0.0690.0360.882
Rpim0.0270.0140.341
Total number of observations165977218613611
Number of reflections250663602067
<I/σ(I)>1545.72.2
Completeness [%]99.998.999.9
Redundancy6.66.16.6
CC(1/2)0.9990.9980.926
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.529320% PEG3350, 0.1 M potassium chloride, 0.1 M Bis-Tris, 0.05 M magnesium chloride

220113

PDB entries from 2024-05-22

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