6O4K
Structure of ALDH7A1 mutant E399Q complexed with NAD
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 4.2.2 |
Synchrotron site | ALS |
Beamline | 4.2.2 |
Temperature [K] | 100 |
Detector technology | CMOS |
Collection date | 2018-05-25 |
Detector | RDI CMOS_8M |
Wavelength(s) | 1.0 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 155.358, 159.106, 157.716 |
Unit cell angles | 90.00, 95.22, 90.00 |
Refinement procedure
Resolution | 49.059 - 2.060 |
R-factor | 0.1934 |
Rwork | 0.191 |
R-free | 0.24590 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 4zuk |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.1) |
Phasing software | PHENIX |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 49.060 | 49.060 | 2.100 |
High resolution limit [Å] | 2.060 | 11.280 | 2.060 |
Rmerge | 0.104 | 0.028 | 0.991 |
Rmeas | 0.123 | 0.033 | 1.209 |
Rpim | 0.065 | 0.017 | 0.681 |
Total number of observations | 5030 | 33779 | |
Number of reflections | 435292 | 1394 | 11177 |
<I/σ(I)> | 8.9 | 30.1 | 1 |
Completeness [%] | 98.5 | 94.2 | 96.2 |
Redundancy | 3.5 | 3.6 | 3 |
CC(1/2) | 0.996 | 0.999 | 0.515 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.2 | 293 | 0.2 M MgCl2, 21% (w/v) PEG 3350, and 0.1 M Bis-Tris pH 6.2 |