6NE7
Structure of G810A mutant of RET protein tyrosine kinase domain.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL14-1 |
Synchrotron site | SSRL |
Beamline | BL14-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-05-05 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.1 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 72.286, 69.858, 78.971 |
Unit cell angles | 90.00, 102.26, 90.00 |
Refinement procedure
Resolution | 39.100 - 1.990 |
R-factor | 0.20559 |
Rwork | 0.203 |
R-free | 0.24921 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2ivt |
RMSD bond length | 0.008 |
RMSD bond angle | 1.503 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.100 | 2.020 |
High resolution limit [Å] | 1.990 | 1.990 |
Rmerge | 0.790 | 0.800 |
Rmeas | 0.950 | 0.973 |
Rpim | 0.051 | 0.542 |
Number of reflections | 25551 | 1251 |
<I/σ(I)> | 13.66 | 1.3 |
Completeness [%] | 96.6 | 95 |
Redundancy | 3.3 | 3 |
CC(1/2) | 0.458 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 299 | 2.2-2.6M Na FORMATE, 0.1M CITRATE pH 5.5 |