6MQ6
Mapping the binding trajectory of a suicide inhibitor in human indoleamine 2,3-dioxygenase 1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 31-ID |
Synchrotron site | APS |
Beamline | 31-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-03-15 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.97931 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 85.327, 96.407, 129.931 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.000 - 3.050 |
R-factor | 0.18629 |
Rwork | 0.184 |
R-free | 0.22898 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5wn8 |
RMSD bond length | 0.001 |
RMSD bond angle | 0.520 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0230) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.500 | 3.210 |
High resolution limit [Å] | 3.050 | 3.050 |
Rmerge | 0.100 | 0.978 |
Rpim | 0.040 | 0.380 |
Number of reflections | 21005 | 3016 |
<I/σ(I)> | 11.8 | 2.1 |
Completeness [%] | 99.7 | 100 |
Redundancy | 7.4 | 7.5 |
CC(1/2) | 0.724 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 10 | 277 | 100 mM sodium thiosulfate, 100 mM CAPS, pH 10.0, 200 mM sodium chloride, 20% w/v PEG8000 |