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6LTV

Crystal Structure of I122A/I330A variant of S-adenosylmethionine synthetase from Cryptosporidium hominis in complex with ONB-SAM (2-nitro benzyme S-adenosyl-methionine)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P13 (MX1)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP13 (MX1)
Temperature [K]100
Detector technologyPIXEL
Collection date2019-09-13
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.9763
Spacegroup nameP 1 21 1
Unit cell lengths63.169, 100.167, 66.945
Unit cell angles90.00, 95.99, 90.00
Refinement procedure
Resolution48.280 - 1.870
R-factor0.1639
Rwork0.162
R-free0.19410
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4odj
RMSD bond length0.025
RMSD bond angle2.378
Data reduction softwareXDS
Data scaling softwareAimless (0.6.3)
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0218)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.2801.920
High resolution limit [Å]1.8701.870
Rmerge0.0950.776
Rmeas0.1040.844
Rpim0.0410.327
Total number of observations441998
Number of reflections672244025
<I/σ(I)>15.2
Completeness [%]99.191.7
Redundancy6.66.3
CC(1/2)0.9970.837
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.5285.1512.5 % MPD (v/v), 12.5 % PEG 1000 (w/v) , 12.5 % PEG 3350 (w/v), 0.1 MES/imidazole pH 6.5, 0.03 M sodium phosphate dibasic dihydrate, 0.03 M ammonium sulfate and 0.03 M sodium nitrate

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