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6LJN

Crystal structure of human Sirt5 in complex with the fluorogenic tetrapeptide substrate P15

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL19U1
Synchrotron siteSSRF
BeamlineBL19U1
Temperature [K]100
Detector technologyPIXEL
Collection date2019-01-03
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)0.97890
Spacegroup nameP 21 2 21
Unit cell lengths42.100, 55.403, 124.685
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution41.410 - 1.800
R-factor0.175
Rwork0.173
R-free0.21200
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5xhs
RMSD bond length0.010
RMSD bond angle1.230
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHASER
Refinement softwarePHENIX (1.10.1_2155)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.840
High resolution limit [Å]1.7961.800
Number of reflections28011
<I/σ(I)>17.01
Completeness [%]99.9
Redundancy12.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP28923%-27% (v/v) PEG 3350, 0.1 M MES, pH 5.5-6.0, 0.1-0.2 M NaCl

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