6LIV
Crystal structure of Tyrosine decarboxylase in complex with PLP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-1A |
Synchrotron site | Photon Factory |
Beamline | BL-1A |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2018-12-15 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.10000 |
Spacegroup name | P 21 2 21 |
Unit cell lengths | 117.911, 180.414, 218.057 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.840 - 2.310 |
R-factor | 0.2277 |
Rwork | 0.227 |
R-free | 0.24990 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1js3 |
RMSD bond length | 0.005 |
RMSD bond angle | 0.673 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.450 |
High resolution limit [Å] | 2.310 | 2.310 |
Rmeas | 0.214 | 0.887 |
Number of reflections | 31999 | |
<I/σ(I)> | 7.12 | 1.7 |
Completeness [%] | 99.7 | 98.4 |
Redundancy | 6.96 | 6.66 |
CC(1/2) | 0.991 | 0.712 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | disodium malonate, HEPES, TCEP-HCl, glycerol |