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6LDT

K245A mutant of L-tyrosine decarboxylase from Methanocaldococcus jannaschii complexed with a post-decarboxylation quinonoid-like intermediate formed with L-tyrosine

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsBRUKER AXS MICROSTAR
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2015-03-14
DetectorMARRESEARCH
Wavelength(s)1.5418
Spacegroup nameP 43 21 2
Unit cell lengths98.370, 98.370, 121.720
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution38.250 - 1.930
R-factor0.1898
Rwork0.188
R-free0.22660
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6ldr
RMSD bond length0.006
RMSD bond angle0.764
Data reduction softwareiMOSFLM (v7.1)
Data scaling softwareAimless (0.5.32)
Phasing softwarePHENIX
Refinement softwarePHENIX (1.17_3644)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]38.2501.980
High resolution limit [Å]1.9301.930
Rmerge0.1291.142
Rmeas0.1341.193
Rpim0.0370.342
Number of reflections455482993
<I/σ(I)>14.12.3
Completeness [%]100.099.8
Redundancy1311.8
CC(1/2)0.9980.716
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.42930.1M sodium citrate pH 5.4, 0.2M sodium potassium tartarate, 2.0M ammonium sulphate

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PDB entries from 2024-05-15

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