6L5Z
Crystal strucutre of AF9 YEATS domain in complex with a cyclopeptide inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-10-11 |
Detector | MAR CCD 130 mm |
Wavelength(s) | 0.9791 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 106.240, 106.240, 45.492 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 40.780 - 3.050 |
R-factor | 0.1937 |
Rwork | 0.190 |
R-free | 0.22180 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4tmp |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 3.100 |
High resolution limit [Å] | 3.050 | 8.270 | 3.050 |
Rmerge | 0.098 | 0.049 | 0.800 |
Rmeas | 0.103 | 0.052 | 0.844 |
Rpim | 0.033 | 0.018 | 0.269 |
Total number of observations | 56564 | ||
Number of reflections | 5816 | 320 | 277 |
<I/σ(I)> | 6.4 | ||
Completeness [%] | 99.8 | 98.8 | 100 |
Redundancy | 9.7 | 8.7 | 9.6 |
CC(1/2) | 0.997 | 0.899 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277 | 20% (w/v)PEG 3350,0.2M Ammonium Nitrate |