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6KXX

Human PPAR alpha ligand binding domain in complex with a synthetic agonist (compound A)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL38B1
Synchrotron siteSPring-8
BeamlineBL38B1
Temperature [K]100
Detector technologyPIXEL
Collection date2018-12-15
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.0
Spacegroup nameP 21 21 21
Unit cell lengths45.060, 60.681, 100.342
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.296 - 1.950
R-factor0.1925
Rwork0.188
R-free0.23620
Structure solution methodMOLECULAR REPLACEMENT
Data reduction softwareXDS
Data scaling softwareAimless (0.5.32)
Phasing softwarePHASER
Refinement softwarePHENIX (1.16_3549)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]45.06045.0602.000
High resolution limit [Å]1.9508.9401.950
Rmerge0.0750.0441.227
Total number of observations261196251419035
Number of reflections205642581417
<I/σ(I)>19.257.92.3
Completeness [%]99.397.699.3
Redundancy12.79.713.4
CC(1/2)0.9990.9980.756
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.4293100 mM HEPES-NaOH, pH 7.4, 19-23% isopropanol, 19-23% PEG 4000

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