6KXX
Human PPAR alpha ligand binding domain in complex with a synthetic agonist (compound A)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SPRING-8 BEAMLINE BL38B1 |
| Synchrotron site | SPring-8 |
| Beamline | BL38B1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2018-12-15 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 1.0 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 45.060, 60.681, 100.342 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 29.296 - 1.950 |
| R-factor | 0.1925 |
| Rwork | 0.188 |
| R-free | 0.23620 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.5.32) |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 45.060 | 45.060 | 2.000 |
| High resolution limit [Å] | 1.950 | 8.940 | 1.950 |
| Rmerge | 0.075 | 0.044 | 1.227 |
| Total number of observations | 261196 | 2514 | 19035 |
| Number of reflections | 20564 | 258 | 1417 |
| <I/σ(I)> | 19.2 | 57.9 | 2.3 |
| Completeness [%] | 99.3 | 97.6 | 99.3 |
| Redundancy | 12.7 | 9.7 | 13.4 |
| CC(1/2) | 0.999 | 0.998 | 0.756 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7.4 | 293 | 100 mM HEPES-NaOH, pH 7.4, 19-23% isopropanol, 19-23% PEG 4000 |






