6KK1
Structure of thermal-stabilised(M8) human GLP-1 receptor transmembrane domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 80 |
Detector technology | CCD |
Collection date | 2017-01-17 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 |
Unit cell lengths | 64.930, 67.350, 83.680 |
Unit cell angles | 91.07, 90.10, 107.96 |
Refinement procedure
Resolution | 49.504 - 2.800 |
R-factor | 0.2458 |
Rwork | 0.244 |
R-free | 0.29000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5vew |
RMSD bond length | 0.009 |
RMSD bond angle | 1.441 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((1.14_3260: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.500 | 2.950 |
High resolution limit [Å] | 2.800 | 2.800 |
Rmerge | 0.130 | 0.400 |
Number of reflections | 25859 | 3446 |
<I/σ(I)> | 5.3 | 2.2 |
Completeness [%] | 77.9 | 70.9 |
Redundancy | 3.1 | 2.6 |
CC(1/2) | 0.980 | 0.760 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIPIDIC CUBIC PHASE | 293 | 0.4-0.45 M ammonium acetate, 0.1 M sodium cacodylate, pH 6.2-6.6, 35-38% PEG400, 3% w/v aminohexanoic acid |