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6K7Q

Crystal structure of thymidylate synthase from shrimp

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U1
Synchrotron siteSSRF
BeamlineBL17U1
Temperature [K]100
Detector technologyCCD
Collection date2015-10-04
DetectorADSC QUANTUM 315
Wavelength(s)0.97931
Spacegroup nameP 1
Unit cell lengths103.270, 103.458, 125.768
Unit cell angles77.40, 84.81, 61.43
Refinement procedure
Resolution89.030 - 2.270
R-factor0.219
Rwork0.218
R-free0.23600
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1hvy
RMSD bond length0.010
RMSD bond angle1.100
Data reduction softwareXDS (Jan 26, 2018, built on 20180409)
Data scaling softwareAimless (version 0.5.29)
Phasing softwarePHASER (2.7.17)
Refinement softwareBUSTER (2.10.2)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]122.7232.277
High resolution limit [Å]2.2692.269
Rmeas0.0760.391
Rpim0.0540.276
Number of reflections2003941671
<I/σ(I)>9.32.8
Completeness [%]97.180.1
Redundancy22
CC(1/2)0.9900.910
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2931 ul protein solution (20 mg/ml in 10 mM HEPES, 150 mM NaCl, 1 mM DTT, pH 7.5) and 1 ul reservoir solution containing 18% (w/v) PEG 3350, 200 mM (NH4)2SO4, 100 mM HEPES, pH 7.5

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PDB entries from 2024-05-15

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